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NSF2010 Metabolomics A functional genomics tool for deciphering functions of Arabidopsis genes in the context of metabolic and regulatory networks |
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PubMed Assistant
PubMed Assistant is a stand-alone Java™ program that helps biologists and medical workers get the most out of PubMed search.
exploRase
exploRase is a MetNet tool written in R for the exploratory multivariate analysis of Systems Biology data.
It provides a graphical user interface (GUI) on top of the analysis functionality provided by R and the Bioconductor project.
ExploRase is designed to be accessible to biologists analyzing omics data in the context of metabolic and regulatory networks.
MetaOmGraph
MetaOmGraph is a tool for plotting and analyzing large sets of data while using as little memory as possible
PathBinderAt
PathBinderAt is a unique, plant-based tool to explore the literature, and to annotate metabolic and regulatory interactions and biomolecules.
PathBinderAt queries the MEDLINE database and retrieves sentences containing two terms of interest; each sentence is a clickable link pointing to the original on-line PubMed citation.
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This NSF-funded project consists of a consortium of labs that will develop metabolomics as a new functional genomics tool for elucidating the functions of Arabidopsis genes.
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